- Microarray statistics and data analyses (e.g., limma, ermineJ, GSEA),
- R based Data Management (e.g. reshape,data.table, RMySQL, ROracle, plyr)
- R / Bioconductor programming, maintenance, and support (e.g. cran,sweave,latex)
- Creating and maintaining R-libraries from existing R-scripts (ProjectTemplate, Subversion, RStudio)
- Update R-scripts to work properly in the current R and Bioconductor release
- Create and maintain annotation libraries
- Support customized arrays of organisms like Human, Mouse, Tomato, Chicken etc.
- Data formatting and data conversions (e.g. from Bioconductor to GSEA, ermineJ, Excel, CSV, SPSS, SAS etc.),
- Automated report generation using Sweave and Latex